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Rapid phototyping of a system-on-a-chip for the BLAST algorithm implementation

Sotiriadis Evripidis, Kozanitis Christos, Chrysos Grigorios, Dollas Apostolos

Απλή Εγγραφή


URIhttp://purl.tuc.gr/dl/dias/30980166-668C-454E-A3F5-939075778B3E-
Αναγνωριστικόhttps://doi.org/10.1109/RSP.2006.31-
Αναγνωριστικόhttp://ieeexplore.ieee.org/document/1630773/-
Γλώσσαen-
Μέγεθος7 pagesen
ΤίτλοςRapid phototyping of a system-on-a-chip for the BLAST algorithm implementationen
ΔημιουργόςSotiriadis Evripidisen
ΔημιουργόςΣωτηριαδης Ευριπιδηςel
ΔημιουργόςKozanitis Christosen
ΔημιουργόςChrysos Grigoriosen
ΔημιουργόςΧρυσος Γρηγοριοςel
ΔημιουργόςDollas Apostolosen
ΔημιουργόςΔολλας Αποστολοςel
ΕκδότηςInstitute of Electrical and Electronics Engineersen
ΠερίληψηIn the course of rapid system prototyping of a large scale design and implementation of the BLAST algorithm for bioinformatics, we evaluated two different design methods. First, we used the "traditional" method of design with modeling in C and design and synthesis using VHDL. Second, we used the automated tools MATLAB/Simulink with two different design flows, i.e. the fully automated one from MATLAB to bitstream, and, the architecture and subsystem development based on the MATLAB/Simulink results. We examine the tradeoffs between designer time, design quality and speed, and resource optimization. We analyze how modern tools such as MATLAB/Simulink can improve architecture design and facilitate "what if" scenarios. We conclude that conventional architecture development and design flow is still required for highly optimized system building but the architecture development capabilities of modern tools need to be assimilated in the design process.en
ΤύποςΔημοσίευση σε Συνέδριοel
ΤύποςConference Publicationen
Άδεια Χρήσηςhttp://creativecommons.org/licenses/by/4.0/en
Ημερομηνία2015-11-17-
Ημερομηνία Δημοσίευσης2006-
Θεματική ΚατηγορίαBio-informaticsen
Θεματική ΚατηγορίαBiological informaticsen
Θεματική Κατηγορίαbioinformaticsen
Θεματική Κατηγορίαbio informaticsen
Θεματική Κατηγορίαbiological informaticsen
Βιβλιογραφική ΑναφοράE. Sotiriades, C. Kozanitis, G. Chrysos and A. Dollas, "Rapid phototyping of a system-on-a-chip for the BLAST algorithm implementation," in Seventeenth IEEE International Workshop on Rapid System Prototyping, 2006, pp. 223-229. doi: 10.1109/RSP.2006.31en

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